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This program is a free software associated with the paper:
Parameter inference for discretely observed stochastic kinetic models using stochastic gradient descent
Yuanfeng Wang, Scott Christley, Eric Mjolsness and Xiaohui Xie
BMC Systems Biology 2010, 4:99 doi:10.1186/1752-0509-4-99.
The code is implemented with Matlab(version 2008a), which can be found here:\\Download SGD (Copyright @ Yuanfeng Wang)
Open and run the file “main_sgd” in the fold using matlab, choose to input the datafile either using graphic interface or by specifying the file directory.
** The GLPKmex package should be installed first before the run. The windows version of GLPKmex is included in the sourcecode. Linux version of glpkmex is can be downloaded here GLPKmex .
Input files:
Output: