Information for 1-TGACGT (Motif 1)


Reverse Opposite:

p-value:1e-1208
log p-value:-2.782e+03
Information Content per bp:1.921
Number of Target Sequences with motif6922.0
Percentage of Target Sequences with motif42.16%
Number of Background Sequences with motif5374.8
Percentage of Background Sequences with motif17.28%
Average Position of motif in Targets202.9 +/- 84.2bp
Average Position of motif in Background193.1 +/- 141.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.31
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:TGACGT
TGACGT

Atf1/MA0604.1/Jaspar

Match Rank:2
Score:0.96
Offset:-1
Orientation:forward strand
Alignment:-TGACGT-
ATGACGTA

Crem/MA0609.1/Jaspar

Match Rank:3
Score:0.93
Offset:-2
Orientation:forward strand
Alignment:--TGACGT--
TATGACGTAA

CREB1/MA0018.2/Jaspar

Match Rank:4
Score:0.91
Offset:0
Orientation:forward strand
Alignment:TGACGT--
TGACGTCA

Atf3/MA0605.1/Jaspar

Match Rank:5
Score:0.90
Offset:-2
Orientation:forward strand
Alignment:--TGACGT
GATGACGT

Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.85
Offset:-2
Orientation:forward strand
Alignment:--TGACGT--
GATGACGTCA

XBP1/MA0844.1/Jaspar

Match Rank:7
Score:0.84
Offset:-2
Orientation:reverse strand
Alignment:--TGACGT------
GATGACGTGGCANT

CREB3/MA0638.1/Jaspar

Match Rank:8
Score:0.84
Offset:-3
Orientation:reverse strand
Alignment:---TGACGT-----
NGATGACGTGGCAN

PB0004.1_Atf1_1/Jaspar

Match Rank:9
Score:0.83
Offset:-4
Orientation:forward strand
Alignment:----TGACGT------
ACGATGACGTCATCGA

CRE(bZIP)/Promoter/Homer

Match Rank:10
Score:0.82
Offset:-1
Orientation:reverse strand
Alignment:-TGACGT-----
GTGACGTCACCG