Information for 21-CCTAAGGG (Motif 13)


Reverse Opposite:

p-value:1e-68
log p-value:-1.580e+02
Information Content per bp:1.791
Number of Target Sequences with motif3886.0
Percentage of Target Sequences with motif23.67%
Number of Background Sequences with motif5659.2
Percentage of Background Sequences with motif18.19%
Average Position of motif in Targets198.3 +/- 110.9bp
Average Position of motif in Background199.3 +/- 129.2bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.83
Offset:-1
Orientation:reverse strand
Alignment:-CCTAAGGG---
GCCTCAGGGCAT

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:2
Score:0.83
Offset:-1
Orientation:forward strand
Alignment:-CCTAAGGG---
SCCTSAGGSCAW

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:3
Score:0.77
Offset:-4
Orientation:reverse strand
Alignment:----CCTAAGGG---
NTCGCCTCAGGCAAT

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:4
Score:0.76
Offset:-4
Orientation:reverse strand
Alignment:----CCTAAGGG---
NTCCCCTCAGGGANT

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:5
Score:0.75
Offset:-4
Orientation:reverse strand
Alignment:----CCTAAGGG---
NTNGCCTCAGGCNNN

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:6
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--CCTAAGGG-
AGCCTCAGGCA

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:7
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--CCTAAGGG-
AGCCTCAGGCA

TFAP2A/MA0003.3/Jaspar

Match Rank:8
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--CCTAAGGG-
NGCCTGAGGCN

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:9
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--CCTAAGGG--
TGCCCNGGGGCA

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:10
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---CCTAAGGG---
TCACCTCTGGGCAG