Information for 21-TCTGA (Motif 15)


Reverse Opposite:

p-value:1e-51
log p-value:-1.176e+02
Information Content per bp:1.530
Number of Target Sequences with motif9990.0
Percentage of Target Sequences with motif60.84%
Number of Background Sequences with motif17113.9
Percentage of Background Sequences with motif55.01%
Average Position of motif in Targets199.7 +/- 116.1bp
Average Position of motif in Background200.6 +/- 122.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.49
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL002.1_INR/Jaspar

Match Rank:1
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---TCTGA
NNNANTGA

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:2
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--TCTGA---
GGTCTGGCAT

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----TCTGA
VBSYGTCTGG

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---TCTGA
CTGTCTGG

PB0060.1_Smad3_1/Jaspar

Match Rank:5
Score:0.65
Offset:-7
Orientation:reverse strand
Alignment:-------TCTGA-----
NNTNNTGTCTGGNNTNG

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:6
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---TCTGA
TWGTCTGV

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:7
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TCTGA----
TGCTGACTCA

POL009.1_DCE_S_II/Jaspar

Match Rank:8
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TCTGA-
GCTGTG

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:9
Score:0.62
Offset:-8
Orientation:reverse strand
Alignment:--------TCTGA----
CCNNACCATCTGGCCTN

Mafb/MA0117.2/Jaspar

Match Rank:10
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----TCTGA--
AAAATGCTGACT