Information for 10-CGAA (Motif 16)


Reverse Opposite:

p-value:1e-27
log p-value:-6.307e+01
Information Content per bp:1.530
Number of Target Sequences with motif9451.0
Percentage of Target Sequences with motif57.56%
Number of Background Sequences with motif16585.8
Percentage of Background Sequences with motif53.31%
Average Position of motif in Targets198.5 +/- 114.2bp
Average Position of motif in Background200.3 +/- 148.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.73
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0034.1_Irf4_1/Jaspar

Match Rank:1
Score:0.73
Offset:-5
Orientation:forward strand
Alignment:-----CGAA------
CGTATCGAAACCAAA

PB0035.1_Irf5_1/Jaspar

Match Rank:2
Score:0.72
Offset:-6
Orientation:forward strand
Alignment:------CGAA-----
ATAAACCGAAACCAA

POL008.1_DCE_S_I/Jaspar

Match Rank:3
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:CGAA--
NGAAGC

PB0036.1_Irf6_1/Jaspar

Match Rank:4
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----CGAA--------
CTGATCGAAACCAAAGT

PB0037.1_Isgf3g_1/Jaspar

Match Rank:5
Score:0.66
Offset:-6
Orientation:forward strand
Alignment:------CGAA-----
CAAAATCGAAACTAA

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CGAA----
ACTGAAACCA

PB0033.1_Irf3_1/Jaspar

Match Rank:7
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------CGAA----
GAGAACCGAAACTG

NFATC1/MA0624.1/Jaspar

Match Rank:8
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CGAA---
NNTGGAAANN

SPIB/MA0081.1/Jaspar

Match Rank:9
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CGAA
AGAGGAA

CENPB/MA0637.1/Jaspar

Match Rank:10
Score:0.60
Offset:-11
Orientation:forward strand
Alignment:-----------CGAA
CCCGCATACAACGAA