Information for 3-CGGAAG (Motif 3)


Reverse Opposite:

p-value:1e-400
log p-value:-9.224e+02
Information Content per bp:1.889
Number of Target Sequences with motif8311.0
Percentage of Target Sequences with motif50.62%
Number of Background Sequences with motif10674.9
Percentage of Background Sequences with motif34.31%
Average Position of motif in Targets201.5 +/- 106.9bp
Average Position of motif in Background197.8 +/- 143.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.75
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.94
Offset:-2
Orientation:reverse strand
Alignment:--CGGAAG--
RCCGGAAGTD

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.92
Offset:-2
Orientation:reverse strand
Alignment:--CGGAAG--
RCCGGAARYN

ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer

Match Rank:3
Score:0.91
Offset:-3
Orientation:forward strand
Alignment:---CGGAAG-
ANCCGGAAGT

MF0001.1_ETS_class/Jaspar

Match Rank:4
Score:0.91
Offset:-2
Orientation:forward strand
Alignment:--CGGAAG
ACCGGAAG

Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer

Match Rank:5
Score:0.91
Offset:-2
Orientation:reverse strand
Alignment:--CGGAAG--
DCCGGAARYN

ETV5/MA0765.1/Jaspar

Match Rank:6
Score:0.90
Offset:-2
Orientation:forward strand
Alignment:--CGGAAG--
ACCGGAAGTG

Gabpa/MA0062.2/Jaspar

Match Rank:7
Score:0.89
Offset:-1
Orientation:forward strand
Alignment:-CGGAAG----
CCGGAAGTGGC

ELK4/MA0076.2/Jaspar

Match Rank:8
Score:0.89
Offset:-2
Orientation:reverse strand
Alignment:--CGGAAG---
NCCGGAAGTGG

ETV4/MA0764.1/Jaspar

Match Rank:9
Score:0.89
Offset:-2
Orientation:forward strand
Alignment:--CGGAAG--
ACCGGAAGTA

ELK3/MA0759.1/Jaspar

Match Rank:10
Score:0.88
Offset:-2
Orientation:forward strand
Alignment:--CGGAAG--
ACCGGAAGTA