Information for 6-CGCCAAA (Motif 4)


Reverse Opposite:

p-value:1e-284
log p-value:-6.557e+02
Information Content per bp:1.687
Number of Target Sequences with motif7997.0
Percentage of Target Sequences with motif48.71%
Number of Background Sequences with motif10878.6
Percentage of Background Sequences with motif34.97%
Average Position of motif in Targets199.6 +/- 109.9bp
Average Position of motif in Background196.4 +/- 145.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.46
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F(E2F)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.78
Offset:-4
Orientation:forward strand
Alignment:----CGCCAAA-
TTCGCGCGAAAA

E2F1/MA0024.3/Jaspar

Match Rank:2
Score:0.74
Offset:-5
Orientation:forward strand
Alignment:-----CGCCAAA
TTTGGCGCCAAA

PB0112.1_E2F2_2/Jaspar

Match Rank:3
Score:0.71
Offset:-7
Orientation:forward strand
Alignment:-------CGCCAAA---
CCTTCGGCGCCAAAAGG

E2F8/MA0865.1/Jaspar

Match Rank:4
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----CGCCAAA
TTTCCCGCCAAA

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--CGCCAAA-
GGCGGGAAAH

ZBTB33/MA0527.1/Jaspar

Match Rank:6
Score:0.69
Offset:-7
Orientation:reverse strand
Alignment:-------CGCCAAA-
NAGNTCTCGCGAGAN

E2F7/MA0758.1/Jaspar

Match Rank:7
Score:0.68
Offset:-6
Orientation:forward strand
Alignment:------CGCCAAA-
TTTTCCCGCCAAAA

PB0113.1_E2F3_2/Jaspar

Match Rank:8
Score:0.68
Offset:-7
Orientation:forward strand
Alignment:-------CGCCAAA---
AGCTCGGCGCCAAAAGC

GFX(?)/Promoter/Homer

Match Rank:9
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----CGCCAAA
ATTCTCGCGAGA

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:10
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CGCCAAA--
TGGCGGGAAAHB