Information for 9-AGGAATKT (Motif 7)


Reverse Opposite:

p-value:1e-205
log p-value:-4.731e+02
Information Content per bp:1.772
Number of Target Sequences with motif3910.0
Percentage of Target Sequences with motif23.81%
Number of Background Sequences with motif4583.3
Percentage of Background Sequences with motif14.73%
Average Position of motif in Targets202.6 +/- 108.5bp
Average Position of motif in Background198.5 +/- 122.5bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.16
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

TEAD4/MA0809.1/Jaspar

Match Rank:1
Score:0.91
Offset:-1
Orientation:reverse strand
Alignment:-AGGAATKT-
NTGGAATGTN

TEAD1/MA0090.2/Jaspar

Match Rank:2
Score:0.89
Offset:-1
Orientation:reverse strand
Alignment:-AGGAATKT-
NTGGAATGTG

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:3
Score:0.88
Offset:-2
Orientation:forward strand
Alignment:--AGGAATKT
CCWGGAATGY

TEAD3/MA0808.1/Jaspar

Match Rank:4
Score:0.88
Offset:0
Orientation:reverse strand
Alignment:AGGAATKT
TGGAATGT

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.88
Offset:-2
Orientation:forward strand
Alignment:--AGGAATKT
NCTGGAATGC

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:6
Score:0.86
Offset:-2
Orientation:forward strand
Alignment:--AGGAATKT
CCWGGAATGY

SPIB/MA0081.1/Jaspar

Match Rank:7
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--AGGAATKT
AGAGGAA---

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:8
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:AGGAATKT--
GGGAATTTCC

PB0178.1_Sox8_2/Jaspar

Match Rank:9
Score:0.68
Offset:-6
Orientation:reverse strand
Alignment:------AGGAATKT
NNTNTCATGAATGT

PB0170.1_Sox17_2/Jaspar

Match Rank:10
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----AGGAATKT----
NTTNTATGAATGTGNNC