Information for 10-CGCWTT (Motif 8)


Reverse Opposite:

p-value:1e-191
log p-value:-4.420e+02
Information Content per bp:1.554
Number of Target Sequences with motif11151.0
Percentage of Target Sequences with motif67.92%
Number of Background Sequences with motif17620.8
Percentage of Background Sequences with motif56.64%
Average Position of motif in Targets201.5 +/- 112.6bp
Average Position of motif in Background197.2 +/- 137.2bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.53
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0008.1_E2F2_1/Jaspar

Match Rank:1
Score:0.66
Offset:-6
Orientation:reverse strand
Alignment:------CGCWTT---
NTCGCGCGCCTTNNN

PB0106.1_Arid5a_2/Jaspar

Match Rank:2
Score:0.63
Offset:-6
Orientation:reverse strand
Alignment:------CGCWTT-----
TNNTTTCGTATTNNANN

PB0009.1_E2F3_1/Jaspar

Match Rank:3
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------CGCWTT---
ANCGCGCGCCCTTNN

PB0180.1_Sp4_2/Jaspar

Match Rank:4
Score:0.62
Offset:-7
Orientation:reverse strand
Alignment:-------CGCWTT--
NNGGCCACGCCTTTN

YY2/MA0748.1/Jaspar

Match Rank:5
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CGCWTT--
GTCCGCCATTA

PH0126.1_Obox6/Jaspar

Match Rank:6
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----CGCWTT----
AAAAACGGATTATTG

Dmbx1/MA0883.1/Jaspar

Match Rank:7
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----CGCWTT------
TGAACCGGATTAATGAA

PH0025.1_Dmbx1/Jaspar

Match Rank:8
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----CGCWTT------
TGAACCGGATTAATGAA

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:9
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CGCWTT-
NGGGATTA

OTX1/MA0711.1/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CGCWTT--
CGGATTAN