Information for 10-GCCGTTA (Motif 9)


Reverse Opposite:

p-value:1e-166
log p-value:-3.824e+02
Information Content per bp:1.961
Number of Target Sequences with motif11737.0
Percentage of Target Sequences with motif71.48%
Number of Background Sequences with motif19051.2
Percentage of Background Sequences with motif61.24%
Average Position of motif in Targets200.6 +/- 113.0bp
Average Position of motif in Background201.2 +/- 137.4bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.55
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:1
Score:0.83
Offset:-1
Orientation:forward strand
Alignment:-GCCGTTA
GGCVGTTR

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:2
Score:0.81
Offset:-2
Orientation:reverse strand
Alignment:--GCCGTTA-
BRRCVGTTDN

PB0046.1_Mybl1_1/Jaspar

Match Rank:3
Score:0.75
Offset:-6
Orientation:forward strand
Alignment:------GCCGTTA----
TTGAAAACCGTTAATTT

PB0045.1_Myb_1/Jaspar

Match Rank:4
Score:0.74
Offset:-6
Orientation:forward strand
Alignment:------GCCGTTA----
ATGGAAACCGTTATTTT

MYBL1/MA0776.1/Jaspar

Match Rank:5
Score:0.72
Offset:0
Orientation:forward strand
Alignment:GCCGTTA-----
ACCGTTAACGGT

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:6
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--GCCGTTA-
TGGCAGTTGG

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:7
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:GCCGTTA-
BCMATTAG

MYBL2/MA0777.1/Jaspar

Match Rank:8
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GCCGTTA-------
AACCGTTAAACGGTC

YY2/MA0748.1/Jaspar

Match Rank:9
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----GCCGTTA
GTCCGCCATTA

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:10
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GCCGTTA
TGTCGGTT-