Information for 9-AAACG (Motif 10)


Reverse Opposite:

p-value:1e-19
log p-value:-4.575e+01
Information Content per bp:1.530
Number of Target Sequences with motif3855.0
Percentage of Target Sequences with motif82.27%
Number of Background Sequences with motif30866.3
Percentage of Background Sequences with motif76.42%
Average Position of motif in Targets1029.6 +/- 553.4bp
Average Position of motif in Background1036.4 +/- 685.5bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)2.17
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

BARHL2/MA0635.1/Jaspar

Match Rank:1
Score:0.81
Offset:-3
Orientation:forward strand
Alignment:---AAACG--
GCTAAACGGT

PH0044.1_Homez/Jaspar

Match Rank:2
Score:0.73
Offset:-5
Orientation:reverse strand
Alignment:-----AAACG-------
NNTAAAAACGATGTTNT

FOXD2/MA0847.1/Jaspar

Match Rank:3
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--AAACG
GTAAACA

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:4
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-AAACG----
NHAACBGYYV

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:5
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:AAACG---
AACCGANA

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:6
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--AAACG-----
AGAAACGAAAGT

FOXG1/MA0613.1/Jaspar

Match Rank:7
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--AAACG-
GTAAACAA

FOXP2/MA0593.1/Jaspar

Match Rank:8
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----AAACG--
AAGTAAACAAA

FOXP3/MA0850.1/Jaspar

Match Rank:9
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--AAACG
GTAAACA

MF0005.1_Forkhead_class/Jaspar

Match Rank:10
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----AAACG
AAATAAACA