Information for 15-CTGTAGT (Motif 11)


Reverse Opposite:

p-value:1e-19
log p-value:-4.567e+01
Information Content per bp:1.921
Number of Target Sequences with motif2919.0
Percentage of Target Sequences with motif62.29%
Number of Background Sequences with motif22319.1
Percentage of Background Sequences with motif55.26%
Average Position of motif in Targets1011.4 +/- 563.1bp
Average Position of motif in Background1000.6 +/- 662.5bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.61
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-CTGTAGT--
GCTGTGGTTT

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:2
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--CTGTAGT---
NNHTGTGGTTWN

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:CTGTAGT---
CTGTGGTTTN

RUNX1/MA0002.2/Jaspar

Match Rank:4
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--CTGTAGT--
GTCTGTGGTTT

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:5
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CTGTAGT--
NNTGTGGTTT

ZNF382(Zf)/HEK293-ZNF382.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CTGTAGT-----------
GNCTGTASTRNTGBCTCHTT

PB0050.1_Osr1_1/Jaspar

Match Rank:7
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----CTGTAGT----
ATTTACAGTAGCAAAA

GFY(?)/Promoter/Homer

Match Rank:8
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----CTGTAGT
GGGAATTGTAGT

PB0091.1_Zbtb3_1/Jaspar

Match Rank:9
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----CTGTAGT------
NNNANTGCAGTGCNNTT

POL009.1_DCE_S_II/Jaspar

Match Rank:10
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CTGTAGT
GCTGTG--