Information for 19-ACGCCGTT (Motif 12)


Reverse Opposite:

p-value:1e-18
log p-value:-4.204e+01
Information Content per bp:1.790
Number of Target Sequences with motif1564.0
Percentage of Target Sequences with motif33.38%
Number of Background Sequences with motif10972.0
Percentage of Background Sequences with motif27.16%
Average Position of motif in Targets1046.9 +/- 469.3bp
Average Position of motif in Background1056.8 +/- 603.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.18
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0180.1_Sp4_2/Jaspar

Match Rank:1
Score:0.69
Offset:-6
Orientation:reverse strand
Alignment:------ACGCCGTT-
NNGGCCACGCCTTTN

YY2/MA0748.1/Jaspar

Match Rank:2
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--ACGCCGTT-
GTCCGCCATTA

PB0131.1_Gmeb1_2/Jaspar

Match Rank:3
Score:0.66
Offset:-6
Orientation:forward strand
Alignment:------ACGCCGTT--
TGGGCGACGTCGTTAA

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:4
Score:0.65
Offset:1
Orientation:forward strand
Alignment:ACGCCGTT-
-GGCVGTTR

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:5
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:ACGCCGTT--
BRRCVGTTDN

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-ACGCCGTT
CACGCA---

POL006.1_BREu/Jaspar

Match Rank:7
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---ACGCCGTT
AGCGCGCC---

Klf12/MA0742.1/Jaspar

Match Rank:8
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----ACGCCGTT---
GACCACGCCCTTATT

PB0143.1_Klf7_2/Jaspar

Match Rank:9
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------ACGCCGTT---
AAGCATACGCCCAACTT

PB0136.1_IRC900814_2/Jaspar

Match Rank:10
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----ACGCCGTT----
TTTTACGACTTTCCAT