Information for 11-TAGGCG (Motif 13)


Reverse Opposite:

p-value:1e-17
log p-value:-4.144e+01
Information Content per bp:1.896
Number of Target Sequences with motif3419.0
Percentage of Target Sequences with motif72.96%
Number of Background Sequences with motif26943.5
Percentage of Background Sequences with motif66.70%
Average Position of motif in Targets1048.8 +/- 459.7bp
Average Position of motif in Background1060.4 +/- 583.5bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.83
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0180.1_Sp4_2/Jaspar

Match Rank:1
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--TAGGCG-------
CAAAGGCGTGGCCAG

POL006.1_BREu/Jaspar

Match Rank:2
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:TAGGCG----
--GGCGCGCT

E2F1/MA0024.3/Jaspar

Match Rank:3
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-TAGGCG-----
TTTGGCGCCAAA

PB0112.1_E2F2_2/Jaspar

Match Rank:4
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----TAGGCG-------
NNNNTTGGCGCCGANNN

PB0113.1_E2F3_2/Jaspar

Match Rank:5
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----TAGGCG-------
NNNNTTGGCGCCGANNN

PB0128.1_Gcm1_2/Jaspar

Match Rank:6
Score:0.65
Offset:-6
Orientation:forward strand
Alignment:------TAGGCG-----
TGCGCATAGGGGAGGAG

EGR2/MA0472.2/Jaspar

Match Rank:7
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----TAGGCG-
TGCGTGGGCGT

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:8
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TAGGCG-
CTAGGCCT

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:9
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TAGGCG---
GGAGGGGGAA

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:10
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----TAGGCG--
NGCGTGGGCGGR