Information for 2-CCGGAAGT (Motif 2)


Reverse Opposite:

p-value:1e-61
log p-value:-1.412e+02
Information Content per bp:1.866
Number of Target Sequences with motif2198.0
Percentage of Target Sequences with motif46.91%
Number of Background Sequences with motif13909.6
Percentage of Background Sequences with motif34.44%
Average Position of motif in Targets1008.5 +/- 344.8bp
Average Position of motif in Background1030.4 +/- 463.7bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.51
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer

Match Rank:1
Score:0.98
Offset:-2
Orientation:forward strand
Alignment:--CCGGAAGT
ANCCGGAAGT

ETS(ETS)/Promoter/Homer

Match Rank:2
Score:0.98
Offset:-2
Orientation:forward strand
Alignment:--CCGGAAGT
AACCGGAAGT

Gabpa/MA0062.2/Jaspar

Match Rank:3
Score:0.97
Offset:0
Orientation:forward strand
Alignment:CCGGAAGT---
CCGGAAGTGGC

ELK3/MA0759.1/Jaspar

Match Rank:4
Score:0.97
Offset:-1
Orientation:forward strand
Alignment:-CCGGAAGT-
ACCGGAAGTA

ELK1/MA0028.2/Jaspar

Match Rank:5
Score:0.97
Offset:-1
Orientation:forward strand
Alignment:-CCGGAAGT-
ACCGGAAGTG

Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.96
Offset:-1
Orientation:reverse strand
Alignment:-CCGGAAGT-
RCCGGAAGTD

GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer

Match Rank:7
Score:0.96
Offset:-2
Orientation:forward strand
Alignment:--CCGGAAGT
NACCGGAAGT

ELK4/MA0076.2/Jaspar

Match Rank:8
Score:0.96
Offset:-1
Orientation:reverse strand
Alignment:-CCGGAAGT--
NCCGGAAGTGG

FEV/MA0156.2/Jaspar

Match Rank:9
Score:0.95
Offset:-1
Orientation:forward strand
Alignment:-CCGGAAGT-
ACCGGAAGTG

ETV1/MA0761.1/Jaspar

Match Rank:10
Score:0.94
Offset:-1
Orientation:forward strand
Alignment:-CCGGAAGT-
ACCGGAAGTA