Information for 4-ACGCTA (Motif 4)


Reverse Opposite:

p-value:1e-33
log p-value:-7.758e+01
Information Content per bp:1.811
Number of Target Sequences with motif3280.0
Percentage of Target Sequences with motif70.00%
Number of Background Sequences with motif24635.2
Percentage of Background Sequences with motif60.99%
Average Position of motif in Targets1027.3 +/- 497.0bp
Average Position of motif in Background1034.7 +/- 617.6bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.66
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:1
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-ACGCTA
CACGCA-

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:2
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----ACGCTA
TBGCACGCAA

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:ACGCTA
-NGCTN

PB0154.1_Osr1_2/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--ACGCTA--------
ACATGCTACCTAATAC

CEBPG/MA0838.1/Jaspar

Match Rank:5
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---ACGCTA-
ATTGCGCAAT

CEBPD/MA0836.1/Jaspar

Match Rank:6
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---ACGCTA-
ATTGCGCAAT

CEBPB/MA0466.2/Jaspar

Match Rank:7
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---ACGCTA-
ATTGCGCAAT

Gmeb1/MA0615.1/Jaspar

Match Rank:8
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------ACGCTA-----
GAGTGTACGTAAGATGG

PB0027.1_Gmeb1_1/Jaspar

Match Rank:9
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------ACGCTA-----
GAGTGTACGTAAGATGG

PB0155.1_Osr2_2/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--ACGCTA--------
ACTTGCTACCTACACC