Information for 9-GGCGGGGC (Motif 7)


Reverse Opposite:

p-value:1e-26
log p-value:-5.994e+01
Information Content per bp:1.530
Number of Target Sequences with motif4533.0
Percentage of Target Sequences with motif96.73%
Number of Background Sequences with motif37554.7
Percentage of Background Sequences with motif92.97%
Average Position of motif in Targets1071.5 +/- 415.2bp
Average Position of motif in Background1071.8 +/- 523.9bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)6.81
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Sp1(Zf)/Promoter/Homer

Match Rank:1
Score:0.89
Offset:-3
Orientation:reverse strand
Alignment:---GGCGGGGC-
GGGGGCGGGGCC

PB0164.1_Smad3_2/Jaspar

Match Rank:2
Score:0.85
Offset:-6
Orientation:reverse strand
Alignment:------GGCGGGGC---
NAGANTGGCGGGGNGNA

POL003.1_GC-box/Jaspar

Match Rank:3
Score:0.85
Offset:-4
Orientation:forward strand
Alignment:----GGCGGGGC--
AGGGGGCGGGGCTG

SP2/MA0516.1/Jaspar

Match Rank:4
Score:0.84
Offset:-7
Orientation:reverse strand
Alignment:-------GGCGGGGC
GGGNGGGGGCGGGGC

SP1/MA0079.3/Jaspar

Match Rank:5
Score:0.84
Offset:-3
Orientation:reverse strand
Alignment:---GGCGGGGC
GGGGGCGGGGC

KLF5/MA0599.1/Jaspar

Match Rank:6
Score:0.83
Offset:-2
Orientation:reverse strand
Alignment:--GGCGGGGC
GGGGNGGGGC

Klf4/MA0039.2/Jaspar

Match Rank:7
Score:0.82
Offset:-2
Orientation:forward strand
Alignment:--GGCGGGGC
TGGGTGGGGC

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:8
Score:0.81
Offset:-2
Orientation:forward strand
Alignment:--GGCGGGGC
DGGGYGKGGC

PB0039.1_Klf7_1/Jaspar

Match Rank:9
Score:0.81
Offset:-5
Orientation:reverse strand
Alignment:-----GGCGGGGC---
NNAGGGGCGGGGTNNA

KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.77
Offset:-4
Orientation:forward strand
Alignment:----GGCGGGGC
RGKGGGCGKGGC