Information for 1-CGGAA (Motif 1)


Reverse Opposite:

p-value:1e-247
log p-value:-5.693e+02
Information Content per bp:1.946
Number of Target Sequences with motif12204.0
Percentage of Target Sequences with motif46.20%
Number of Background Sequences with motif9207.8
Percentage of Background Sequences with motif36.10%
Average Position of motif in Targets198.9 +/- 112.8bp
Average Position of motif in Background198.1 +/- 132.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.66
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.92
Offset:-2
Orientation:reverse strand
Alignment:--CGGAA---
RCCGGAAGTD

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.91
Offset:-2
Orientation:reverse strand
Alignment:--CGGAA---
RCCGGAARYN

Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer

Match Rank:3
Score:0.88
Offset:-2
Orientation:reverse strand
Alignment:--CGGAA---
DCCGGAARYN

MF0001.1_ETS_class/Jaspar

Match Rank:4
Score:0.87
Offset:-2
Orientation:forward strand
Alignment:--CGGAA-
ACCGGAAG

ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer

Match Rank:5
Score:0.86
Offset:-3
Orientation:forward strand
Alignment:---CGGAA--
ANCCGGAAGT

ETV5/MA0765.1/Jaspar

Match Rank:6
Score:0.85
Offset:-2
Orientation:forward strand
Alignment:--CGGAA---
ACCGGAAGTG

ETV4/MA0764.1/Jaspar

Match Rank:7
Score:0.85
Offset:-2
Orientation:forward strand
Alignment:--CGGAA---
ACCGGAAGTA

ELK3/MA0759.1/Jaspar

Match Rank:8
Score:0.84
Offset:-2
Orientation:forward strand
Alignment:--CGGAA---
ACCGGAAGTA

ELK4/MA0076.2/Jaspar

Match Rank:9
Score:0.84
Offset:-2
Orientation:reverse strand
Alignment:--CGGAA----
NCCGGAAGTGG

Gabpa/MA0062.2/Jaspar

Match Rank:10
Score:0.84
Offset:-1
Orientation:forward strand
Alignment:-CGGAA-----
CCGGAAGTGGC