Information for 14-GTCTGCG (Motif 10)


Reverse Opposite:

p-value:1e-86
log p-value:-1.995e+02
Information Content per bp:1.954
Number of Target Sequences with motif17133.0
Percentage of Target Sequences with motif64.85%
Number of Background Sequences with motif15026.2
Percentage of Background Sequences with motif58.92%
Average Position of motif in Targets200.4 +/- 112.3bp
Average Position of motif in Background203.4 +/- 131.3bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.60
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.81
Offset:-4
Orientation:forward strand
Alignment:----GTCTGCG
VBSYGTCTGG-

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.78
Offset:-2
Orientation:forward strand
Alignment:--GTCTGCG
CTGTCTGG-

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--GTCTGCG
TWGTCTGV-

HINFP/MA0131.2/Jaspar

Match Rank:4
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----GTCTGCG-
CAACGTCCGCGG

PB0060.1_Smad3_1/Jaspar

Match Rank:5
Score:0.67
Offset:-6
Orientation:reverse strand
Alignment:------GTCTGCG----
NNTNNTGTCTGGNNTNG

NRL/MA0842.1/Jaspar

Match Rank:6
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GTCTGCG----
GTCAGCANNTN

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:7
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GTCTGCG
TGAGTCAGCA

POL009.1_DCE_S_II/Jaspar

Match Rank:8
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GTCTGCG
-GCTGTG

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:9
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GTCTGCG--
GGTCTGGCAT

Mafb/MA0117.2/Jaspar

Match Rank:10
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GTCTGCG----
NGTCAGCANTTT