Information for 12-CCGAAAGG (Motif 12)


Reverse Opposite:

p-value:1e-85
log p-value:-1.964e+02
Information Content per bp:1.594
Number of Target Sequences with motif16948.0
Percentage of Target Sequences with motif64.15%
Number of Background Sequences with motif14855.3
Percentage of Background Sequences with motif58.25%
Average Position of motif in Targets200.8 +/- 113.6bp
Average Position of motif in Background199.4 +/- 124.6bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0137.1_Irf3_2/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CCGAAAGG-----
GGAGAAAGGTGCGA

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:2
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CCGAAAGG---
ANGNAAAGGTCA

PB0049.1_Nr2f2_1/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CCGAAAGG-------
TCTCAAAGGTCACGAG

PB0053.1_Rara_1/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CCGAAAGG-------
TCTCAAAGGTCACCTG

ELK1/MA0028.2/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CCGAAAGG-
ACCGGAAGTG

MF0001.1_ETS_class/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CCGAAAGG
ACCGGAAG-

ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer

Match Rank:7
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CCGAAAGG
ANCCGGAAGT

Gabpa/MA0062.2/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CCGAAAGG---
CCGGAAGTGGC

ETS(ETS)/Promoter/Homer

Match Rank:9
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CCGAAAGG
AACCGGAAGT

ELK4/MA0076.2/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CCGAAAGG--
NCCGGAAGTGG