Information for 16-CRGTC (Motif 17)


Reverse Opposite:

p-value:1e-60
log p-value:-1.383e+02
Information Content per bp:1.921
Number of Target Sequences with motif18202.0
Percentage of Target Sequences with motif68.90%
Number of Background Sequences with motif16350.7
Percentage of Background Sequences with motif64.11%
Average Position of motif in Targets200.1 +/- 113.1bp
Average Position of motif in Background200.6 +/- 129.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.43
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS2/MA0774.1/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-CRGTC--
GCTGTCAA

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CRGTC---
CTGTCTGG

MEIS3/MA0775.1/Jaspar

Match Rank:3
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CRGTC--
CCTGTCAA

MEIS1/MA0498.2/Jaspar

Match Rank:4
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CRGTC--
NTGTCAN

POL002.1_INR/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CRGTC--
TCAGTCTT

PH0141.1_Pknox2/Jaspar

Match Rank:6
Score:0.64
Offset:-6
Orientation:forward strand
Alignment:------CRGTC-----
AAGCACCTGTCAATAT

PH0169.1_Tgif1/Jaspar

Match Rank:7
Score:0.63
Offset:-6
Orientation:reverse strand
Alignment:------CRGTC------
NNNCAGCTGTCAATATN

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:8
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CRGTC---
--GTCATN

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:9
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CRGTC--
BRRCVGTTDN

PH0105.1_Meis3/Jaspar

Match Rank:10
Score:0.62
Offset:-6
Orientation:forward strand
Alignment:------CRGTC-----
AATTACCTGTCAATAC