Information for 20-TTAAC (Motif 19)


Reverse Opposite:

p-value:1e-51
log p-value:-1.188e+02
Information Content per bp:1.925
Number of Target Sequences with motif12165.0
Percentage of Target Sequences with motif46.05%
Number of Background Sequences with motif10565.5
Percentage of Background Sequences with motif41.43%
Average Position of motif in Targets199.5 +/- 115.9bp
Average Position of motif in Background199.4 +/- 125.7bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.37
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0081.1_Tcf1_1/Jaspar

Match Rank:1
Score:0.86
Offset:-6
Orientation:forward strand
Alignment:------TTAAC------
ACTTAGTTAACTAAAAA

PB0109.1_Bbx_2/Jaspar

Match Rank:2
Score:0.84
Offset:-7
Orientation:reverse strand
Alignment:-------TTAAC-----
NNNNCTGTTAACNNTNN

PH0167.1_Tcf1/Jaspar

Match Rank:3
Score:0.83
Offset:-6
Orientation:forward strand
Alignment:------TTAAC------
CCTTAGTTAACTAAAAT

HMBOX1/MA0895.1/Jaspar

Match Rank:4
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-TTAAC----
GTTAACTAGN

PH0168.1_Hnf1b/Jaspar

Match Rank:5
Score:0.79
Offset:-5
Orientation:forward strand
Alignment:-----TTAAC-------
AGCTGTTAACTAGCCGT

MYBL1/MA0776.1/Jaspar

Match Rank:6
Score:0.79
Offset:-4
Orientation:forward strand
Alignment:----TTAAC---
ACCGTTAACGGT

PH0040.1_Hmbox1/Jaspar

Match Rank:7
Score:0.75
Offset:-4
Orientation:reverse strand
Alignment:----TTAAC--------
GANGTTAACTAGTTTNN

Barhl1/MA0877.1/Jaspar

Match Rank:8
Score:0.72
Offset:-5
Orientation:reverse strand
Alignment:-----TTAAC
NNCAATTANN

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:9
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---TTAAC
YCATTAMC

NKX6-1/MA0674.1/Jaspar

Match Rank:10
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----TTAAC
GTAATTAA-