Information for 22-CGTTGCW (Motif 22)


Reverse Opposite:

p-value:1e-38
log p-value:-8.895e+01
Information Content per bp:1.626
Number of Target Sequences with motif3582.0
Percentage of Target Sequences with motif13.56%
Number of Background Sequences with motif2796.4
Percentage of Background Sequences with motif10.96%
Average Position of motif in Targets200.6 +/- 114.5bp
Average Position of motif in Background200.4 +/- 128.5bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-CGTTGCW--
GCATTCCAGN

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:2
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--CGTTGCW------
NCCGTTGCTANGNGN

TEAD3/MA0808.1/Jaspar

Match Rank:3
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CGTTGCW
ACATTCCA

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:4
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CGTTGCW--
RCATTCCWGG

Pax2/MA0067.1/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CGTTGCW
NCGTGACN

TEAD1/MA0090.2/Jaspar

Match Rank:6
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CGTTGCW-
CACATTCCAT

PB0147.1_Max_2/Jaspar

Match Rank:7
Score:0.64
Offset:-6
Orientation:reverse strand
Alignment:------CGTTGCW-
NNGTCGCGTGNCAC

PB0055.1_Rfx4_1/Jaspar

Match Rank:8
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CGTTGCW------
NNCGTTGCTATGGNN

TEAD4/MA0809.1/Jaspar

Match Rank:9
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CGTTGCW-
CACATTCCAT

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:10
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CGTTGCW--
RCATTCCWGG