Information for 7-TRCGTCA (Motif 3)


Reverse Opposite:

p-value:1e-136
log p-value:-3.149e+02
Information Content per bp:1.733
Number of Target Sequences with motif5436.0
Percentage of Target Sequences with motif20.58%
Number of Background Sequences with motif3790.5
Percentage of Background Sequences with motif14.86%
Average Position of motif in Targets198.4 +/- 115.2bp
Average Position of motif in Background196.4 +/- 123.5bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Atf1/MA0604.1/Jaspar

Match Rank:1
Score:0.89
Offset:0
Orientation:reverse strand
Alignment:TRCGTCA-
TACGTCAT

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:2
Score:0.85
Offset:1
Orientation:reverse strand
Alignment:TRCGTCA
-ACGTCA

CREB1/MA0018.2/Jaspar

Match Rank:3
Score:0.82
Offset:-1
Orientation:reverse strand
Alignment:-TRCGTCA
TGACGTCA

Atf3/MA0605.1/Jaspar

Match Rank:4
Score:0.81
Offset:1
Orientation:reverse strand
Alignment:TRCGTCA--
-ACGTCATC

Crem/MA0609.1/Jaspar

Match Rank:5
Score:0.81
Offset:-1
Orientation:reverse strand
Alignment:-TRCGTCA--
TTACGTCATN

FOS::JUN/MA0099.2/Jaspar

Match Rank:6
Score:0.79
Offset:0
Orientation:reverse strand
Alignment:TRCGTCA
TGAGTCA

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:7
Score:0.77
Offset:3
Orientation:reverse strand
Alignment:TRCGTCA--
---GTCATN

Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-TRCGTCA--
TGACGTCATC

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--TRCGTCA-
GATGAGTCAT

Pax2/MA0067.1/Jaspar

Match Rank:10
Score:0.74
Offset:2
Orientation:forward strand
Alignment:TRCGTCA---
--AGTCACGC