Information for 10-TAARGCS (Motif 5)


Reverse Opposite:

p-value:1e-114
log p-value:-2.626e+02
Information Content per bp:1.715
Number of Target Sequences with motif16473.0
Percentage of Target Sequences with motif62.36%
Number of Background Sequences with motif14141.4
Percentage of Background Sequences with motif55.45%
Average Position of motif in Targets200.9 +/- 115.0bp
Average Position of motif in Background199.5 +/- 126.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.41
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0158.1_Rhox11_2/Jaspar

Match Rank:1
Score:0.64
Offset:-6
Orientation:reverse strand
Alignment:------TAARGCS----
TCNCTTTACAGCGNNNT

Rhox11/MA0629.1/Jaspar

Match Rank:2
Score:0.64
Offset:-6
Orientation:reverse strand
Alignment:------TAARGCS----
TCNNTTTACAGCGNNNT

PH0157.1_Rhox11_1/Jaspar

Match Rank:3
Score:0.64
Offset:-6
Orientation:reverse strand
Alignment:------TAARGCS----
TCNNTTTACAGCGNNNT

YY2/MA0748.1/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TAARGCS---
TAATGGCGGNC

PB0008.1_E2F2_1/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TAARGCS------
ATAAAGGCGCGCGAT

PB0009.1_E2F3_1/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TAARGCS------
ATAAGGGCGCGCGAT

PB0180.1_Sp4_2/Jaspar

Match Rank:7
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TAARGCS-------
CAAAGGCGTGGCCAG

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TAARGCS
--CAGCC

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TAARGCS---
--AGGCCTNG

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:10
Score:0.58
Offset:2
Orientation:forward strand
Alignment:TAARGCS---
--AGGCCTAG