Information for 7-CGTACGAA (Motif 7)


Reverse Opposite:

p-value:1e-97
log p-value:-2.251e+02
Information Content per bp:1.673
Number of Target Sequences with motif15429.0
Percentage of Target Sequences with motif58.40%
Number of Background Sequences with motif13251.8
Percentage of Background Sequences with motif51.96%
Average Position of motif in Targets200.3 +/- 112.1bp
Average Position of motif in Background200.4 +/- 134.1bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.53
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Gmeb1/MA0615.1/Jaspar

Match Rank:1
Score:0.61
Offset:-7
Orientation:forward strand
Alignment:-------CGTACGAA--
GAGTGTACGTAAGATGG

PB0027.1_Gmeb1_1/Jaspar

Match Rank:2
Score:0.61
Offset:-7
Orientation:forward strand
Alignment:-------CGTACGAA--
GAGTGTACGTAAGATGG

PB0094.1_Zfp128_1/Jaspar

Match Rank:3
Score:0.60
Offset:-7
Orientation:forward strand
Alignment:-------CGTACGAA--
TCTTTGGCGTACCCTAA

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:4
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CGTACGAA--
CSTGGGAAAD

PB0044.1_Mtf1_1/Jaspar

Match Rank:5
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CGTACGAA----
GGGCCGTGTGCAAAAA

POL001.1_MTE/Jaspar

Match Rank:6
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CGTACGAA--------
TTTCGAGCGGAACGGTCGC

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:7
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CGTACGAA
GCACGTACCC-

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:8
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CGTACGAA
TACGTGCV--

PB0055.1_Rfx4_1/Jaspar

Match Rank:9
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CGTACGAA----
TACCATAGCAACGGT

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:10
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---CGTACGAA----
CCGCATAGCAACGGA