Information for 8-CGAATY (Motif 8)


Reverse Opposite:

p-value:1e-96
log p-value:-2.224e+02
Information Content per bp:1.654
Number of Target Sequences with motif5655.0
Percentage of Target Sequences with motif21.41%
Number of Background Sequences with motif4198.4
Percentage of Background Sequences with motif16.46%
Average Position of motif in Targets198.8 +/- 120.7bp
Average Position of motif in Background194.0 +/- 125.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

NFY(CCAAT)/Promoter/Homer

Match Rank:1
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--CGAATY--
AGCCAATCGG

NFYB/MA0502.1/Jaspar

Match Rank:2
Score:0.71
Offset:-7
Orientation:forward strand
Alignment:-------CGAATY--
AAATGGACCAATCAG

PAX4/MA0068.2/Jaspar

Match Rank:3
Score:0.70
Offset:0
Orientation:forward strand
Alignment:CGAATY--
CTAATTAG

Lhx8/MA0705.1/Jaspar

Match Rank:4
Score:0.69
Offset:0
Orientation:forward strand
Alignment:CGAATY--
CTAATTAG

POL004.1_CCAAT-box/Jaspar

Match Rank:5
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----CGAATY-
ACTAGCCAATCA

PH0089.1_Isx/Jaspar

Match Rank:6
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----CGAATY------
ACTCCTAATTAGTCGT

LHX2/MA0700.1/Jaspar

Match Rank:7
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CGAATY---
ACTAATTAAC

VSX2/MA0726.1/Jaspar

Match Rank:8
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CGAATY--
CTAATTAG

VSX1/MA0725.1/Jaspar

Match Rank:9
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CGAATY--
CTAATTAT

NFYA/MA0060.2/Jaspar

Match Rank:10
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----CGAATY--------
TGGACCAATCAGCACTCT