Information for 10-TTTTSSCG (Motif 9)


Reverse Opposite:

p-value:1e-87
log p-value:-2.009e+02
Information Content per bp:1.534
Number of Target Sequences with motif9760.0
Percentage of Target Sequences with motif36.94%
Number of Background Sequences with motif7957.6
Percentage of Background Sequences with motif31.20%
Average Position of motif in Targets198.6 +/- 113.2bp
Average Position of motif in Background197.9 +/- 127.6bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.19
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F(E2F)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.82
Offset:0
Orientation:reverse strand
Alignment:TTTTSSCG----
TTTTCGCGCGAA

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:2
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-TTTTSSCG---
VDTTTCCCGCCA

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:TTTTSSCG--
DTTTCCCGCC

E2F7/MA0758.1/Jaspar

Match Rank:4
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TTTTSSCG------
TTTTCCCGCCAAAA

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:5
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:TTTTSSCG----
--TTCCCGCCWG

E2F4/MA0470.1/Jaspar

Match Rank:6
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TTTTSSCG---
NNTTCCCGCCC

NFATC2/MA0152.1/Jaspar

Match Rank:7
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TTTTSSCG
TTTTCCA-

E2F8/MA0865.1/Jaspar

Match Rank:8
Score:0.64
Offset:1
Orientation:forward strand
Alignment:TTTTSSCG-----
-TTTCCCGCCAAA

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TTTTSSCG--
NYTTCCCGCC

PB0112.1_E2F2_2/Jaspar

Match Rank:10
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TTTTSSCG-------
NNNNTTGGCGCCGANNN