Information for 1-GGCGG (Motif 1)


Reverse Opposite:

p-value:1e-38
log p-value:-8.805e+01
Information Content per bp:1.778
Number of Target Sequences with motif6490.0
Percentage of Target Sequences with motif98.05%
Number of Background Sequences with motif36010.9
Percentage of Background Sequences with motif94.70%
Average Position of motif in Targets1082.9 +/- 413.7bp
Average Position of motif in Background1073.2 +/- 567.4bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)8.37
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0164.1_Smad3_2/Jaspar

Match Rank:1
Score:0.82
Offset:-6
Orientation:reverse strand
Alignment:------GGCGG------
NAGANTGGCGGGGNGNA

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.77
Offset:0
Orientation:forward strand
Alignment:GGCGG-----
GGCGGGAAAH

POL006.1_BREu/Jaspar

Match Rank:3
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:GGCGG---
GGCGCGCT

E2F4/MA0470.1/Jaspar

Match Rank:4
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-GGCGG-----
GGGCGGGAAGG

SP2/MA0516.1/Jaspar

Match Rank:5
Score:0.75
Offset:-7
Orientation:reverse strand
Alignment:-------GGCGG---
GGGNGGGGGCGGGGC

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:6
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--GGCGG---
CWGGCGGGAA

YY2/MA0748.1/Jaspar

Match Rank:7
Score:0.74
Offset:-4
Orientation:reverse strand
Alignment:----GGCGG--
TAATGGCGGNC

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:8
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-GGCGG------
TGGCGGGAAAHB

Sp1(Zf)/Promoter/Homer

Match Rank:9
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---GGCGG----
GGGGGCGGGGCC

PB0202.1_Zfp410_2/Jaspar

Match Rank:10
Score:0.71
Offset:-7
Orientation:reverse strand
Alignment:-------GGCGG-----
NNTNNGGGGCGGNGNGN