Information for 4-AATCG (Motif 10)


Reverse Opposite:

p-value:1e-14
log p-value:-3.235e+01
Information Content per bp:1.530
Number of Target Sequences with motif3897.0
Percentage of Target Sequences with motif58.88%
Number of Background Sequences with motif20456.4
Percentage of Background Sequences with motif53.80%
Average Position of motif in Targets1033.3 +/- 535.4bp
Average Position of motif in Background1038.4 +/- 673.7bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.62
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

VENTX/MA0724.1/Jaspar

Match Rank:1
Score:0.79
Offset:-2
Orientation:reverse strand
Alignment:--AATCG--
CTAATCGNT

OTX1/MA0711.1/Jaspar

Match Rank:2
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--AATCG-
TTAATCCG

Gfi1/MA0038.1/Jaspar

Match Rank:3
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--AATCG---
CAAATCACTG

BARX1/MA0875.1/Jaspar

Match Rank:4
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--AATCG-
NTAATTGN

PB0185.1_Tcf1_2/Jaspar

Match Rank:5
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---AATCG------
NNTAATCCNGNCNN

BSX/MA0876.1/Jaspar

Match Rank:6
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--AATCG-
NTAATTGG

CUX2/MA0755.1/Jaspar

Match Rank:7
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-AATCG----
TAATCGATAA

ONECUT1/MA0679.1/Jaspar

Match Rank:8
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----AATCG-----
AAAAAATCGATAAT

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:9
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--AATCG-
YTAATCCY

ONECUT2/MA0756.1/Jaspar

Match Rank:10
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----AATCG-----
AAAAAATCGATAAT