Information for 15-TTCGTTTA (Motif 12)


Reverse Opposite:

p-value:1e-13
log p-value:-3.169e+01
Information Content per bp:1.774
Number of Target Sequences with motif1966.0
Percentage of Target Sequences with motif29.70%
Number of Background Sequences with motif9589.1
Percentage of Background Sequences with motif25.22%
Average Position of motif in Targets986.6 +/- 623.4bp
Average Position of motif in Background974.2 +/- 737.0bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.24
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

BARHL2/MA0635.1/Jaspar

Match Rank:1
Score:0.79
Offset:0
Orientation:reverse strand
Alignment:TTCGTTTA--
ANCGTTTANN

PB0016.1_Foxj1_1/Jaspar

Match Rank:2
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----TTCGTTTA----
NNNNTTTGTTTACNNT

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:3
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---TTCGTTTA-
ACTTTCGTTTCT

Foxj3/MA0851.1/Jaspar

Match Rank:4
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---TTCGTTTA------
NNNTTTGTTTACNTTNN

PB0017.1_Foxj3_1/Jaspar

Match Rank:5
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---TTCGTTTA------
NNNTTTGTTTACNTTNN

FOXP1/MA0481.1/Jaspar

Match Rank:6
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TTCGTTTA------
CTTTGTTTACTTTTN

PH0044.1_Homez/Jaspar

Match Rank:7
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----TTCGTTTA----
AAAACATCGTTTTTAAG

Foxk1/MA0852.1/Jaspar

Match Rank:8
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---TTCGTTTA------
NNNTTTGTTTACATTTN

PB0018.1_Foxk1_1/Jaspar

Match Rank:9
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---TTCGTTTA------
NNNTTTGTTTACATTTN

PB0037.1_Isgf3g_1/Jaspar

Match Rank:10
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----TTCGTTTA--
TNAGTTTCGATTTTN