Information for 17-TACGGTTV (Motif 13)


Reverse Opposite:

p-value:1e-12
log p-value:-2.949e+01
Information Content per bp:1.679
Number of Target Sequences with motif2960.0
Percentage of Target Sequences with motif44.72%
Number of Background Sequences with motif15181.9
Percentage of Background Sequences with motif39.93%
Average Position of motif in Targets1040.9 +/- 554.9bp
Average Position of motif in Background1050.0 +/- 678.4bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.35
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:1
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-TACGGTTV
TGTCGGTT-

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:2
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-TACGGTTV-
BRRCVGTTDN

RUNX2/MA0511.2/Jaspar

Match Rank:3
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-TACGGTTV
TTGCGGTTT

PB0045.1_Myb_1/Jaspar

Match Rank:4
Score:0.69
Offset:-5
Orientation:reverse strand
Alignment:-----TACGGTTV----
NNNNTAACGGTTNNNAN

PB0046.1_Mybl1_1/Jaspar

Match Rank:5
Score:0.69
Offset:-5
Orientation:reverse strand
Alignment:-----TACGGTTV----
NNANTAACGGTTNNNAN

RUNX3/MA0684.1/Jaspar

Match Rank:6
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TACGGTTV
TTTGCGGTTT

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:7
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TACGGTTV
GGCVGTTR

ETV2/MA0762.1/Jaspar

Match Rank:8
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----TACGGTTV
TATTTCCGGTT-

Nr2e3/MA0164.1/Jaspar

Match Rank:9
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TACGGTTV
-AAGCTTG

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:10
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TACGGTTV-
TGGCAGTTGG