Information for 22-GTCACGTG (Motif 15)


Reverse Opposite:

p-value:1e-9
log p-value:-2.300e+01
Information Content per bp:1.880
Number of Target Sequences with motif1370.0
Percentage of Target Sequences with motif20.70%
Number of Background Sequences with motif6614.3
Percentage of Background Sequences with motif17.39%
Average Position of motif in Targets996.7 +/- 458.4bp
Average Position of motif in Background992.7 +/- 561.5bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.16
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Arntl/MA0603.1/Jaspar

Match Rank:1
Score:0.95
Offset:-1
Orientation:forward strand
Alignment:-GTCACGTG-
GGTCACGTGC

USF1/MA0093.2/Jaspar

Match Rank:2
Score:0.94
Offset:-1
Orientation:reverse strand
Alignment:-GTCACGTG--
GGTCACGTGGC

TFEB/MA0692.1/Jaspar

Match Rank:3
Score:0.93
Offset:0
Orientation:reverse strand
Alignment:GTCACGTG--
GTCACGTGAT

TFE3/MA0831.1/Jaspar

Match Rank:4
Score:0.92
Offset:0
Orientation:reverse strand
Alignment:GTCACGTG--
GTCACGTGNT

Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer

Match Rank:5
Score:0.92
Offset:0
Orientation:forward strand
Alignment:GTCACGTG--
GTCACGTGGT

Mitf/MA0620.1/Jaspar

Match Rank:6
Score:0.91
Offset:-1
Orientation:forward strand
Alignment:-GTCACGTG-
GGTCACGTGG

E-box(bHLH)/Promoter/Homer

Match Rank:7
Score:0.91
Offset:-3
Orientation:forward strand
Alignment:---GTCACGTG-
CCGGTCACGTGA

BHLHE41/MA0636.1/Jaspar

Match Rank:8
Score:0.91
Offset:0
Orientation:reverse strand
Alignment:GTCACGTG--
GTCACGTGAC

USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.91
Offset:-1
Orientation:forward strand
Alignment:-GTCACGTG-
GGTCACGTGA

USF2/MA0526.1/Jaspar

Match Rank:10
Score:0.89
Offset:-1
Orientation:reverse strand
Alignment:-GTCACGTG--
GGTCACATGAC