Information for 25-CACGGCCG (Motif 17)


Reverse Opposite:

p-value:1e-6
log p-value:-1.474e+01
Information Content per bp:1.908
Number of Target Sequences with motif921.0
Percentage of Target Sequences with motif13.91%
Number of Background Sequences with motif4460.8
Percentage of Background Sequences with motif11.73%
Average Position of motif in Targets1095.4 +/- 435.7bp
Average Position of motif in Background1087.0 +/- 590.1bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CACGGCCG
GCACGTNC-

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:2
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CACGGCCG
YAACBGCC-

HINFP/MA0131.2/Jaspar

Match Rank:3
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CACGGCCG---
CAACGTCCGCGG

KLF14/MA0740.1/Jaspar

Match Rank:4
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CACGGCCG---
GGCCACGCCCCCTT

Klf12/MA0742.1/Jaspar

Match Rank:5
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CACGGCCG----
GACCACGCCCTTATT

SP8/MA0747.1/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CACGGCCG--
GCCACGCCCACT

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:7
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CACGGCCG
GCACGTAY-

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:8
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CACGGCCG
NHAACBGYYV

SP3/MA0746.1/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CACGGCCG-
GCCACGCCCCC

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:10
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CACGGCCG-
GCACGTACCC