Information for 23-CCGGGCC (Motif 18)


Reverse Opposite:

p-value:1e-5
log p-value:-1.232e+01
Information Content per bp:1.530
Number of Target Sequences with motif3837.0
Percentage of Target Sequences with motif57.97%
Number of Background Sequences with motif20923.0
Percentage of Background Sequences with motif55.02%
Average Position of motif in Targets1112.1 +/- 423.8bp
Average Position of motif in Background1099.8 +/- 586.2bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.86
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:1
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:CCGGGCC-
CTAGGCCT

Zfx/MA0146.2/Jaspar

Match Rank:2
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----CCGGGCC--
GGGGCCGAGGCCTG

POL006.1_BREu/Jaspar

Match Rank:3
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-CCGGGCC
AGCGCGCC

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:CCGGGCC-
CNAGGCCT

PB0153.1_Nr2f2_2/Jaspar

Match Rank:5
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----CCGGGCC-----
CGCGCCGGGTCACGTA

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CCGGGCC
WDNCTGGGCA

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------CCGGGCC-
ACATGCCCGGGCAT

THAP1/MA0597.1/Jaspar

Match Rank:8
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CCGGGCC-
TNNGGGCAG

PB0157.1_Rara_2/Jaspar

Match Rank:9
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CCGGGCC-----
AGAGCGGGGTCAAGTA

Sp1(Zf)/Promoter/Homer

Match Rank:10
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----CCGGGCC
GGGGGCGGGGCC