Information for 1-CGGAAGTA (Motif 2)


Reverse Opposite:

p-value:1e-33
log p-value:-7.778e+01
Information Content per bp:1.801
Number of Target Sequences with motif3394.0
Percentage of Target Sequences with motif51.28%
Number of Background Sequences with motif16417.1
Percentage of Background Sequences with motif43.17%
Average Position of motif in Targets1021.2 +/- 420.3bp
Average Position of motif in Background1034.9 +/- 557.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.53
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ETV6/MA0645.1/Jaspar

Match Rank:1
Score:0.94
Offset:-2
Orientation:forward strand
Alignment:--CGGAAGTA
AGCGGAAGTG

ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer

Match Rank:2
Score:0.92
Offset:-3
Orientation:forward strand
Alignment:---CGGAAGTA
ANCCGGAAGT-

ETS(ETS)/Promoter/Homer

Match Rank:3
Score:0.92
Offset:-3
Orientation:forward strand
Alignment:---CGGAAGTA
AACCGGAAGT-

ELK3/MA0759.1/Jaspar

Match Rank:4
Score:0.91
Offset:-2
Orientation:forward strand
Alignment:--CGGAAGTA
ACCGGAAGTA

Gabpa/MA0062.2/Jaspar

Match Rank:5
Score:0.91
Offset:-1
Orientation:forward strand
Alignment:-CGGAAGTA--
CCGGAAGTGGC

Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.91
Offset:-2
Orientation:reverse strand
Alignment:--CGGAAGTA
RCCGGAAGTD

ELK1/MA0028.2/Jaspar

Match Rank:7
Score:0.90
Offset:-2
Orientation:forward strand
Alignment:--CGGAAGTA
ACCGGAAGTG

PB0011.1_Ehf_1/Jaspar

Match Rank:8
Score:0.90
Offset:-6
Orientation:forward strand
Alignment:------CGGAAGTA-
AGGACCCGGAAGTAA

ETV4/MA0764.1/Jaspar

Match Rank:9
Score:0.89
Offset:-2
Orientation:forward strand
Alignment:--CGGAAGTA
ACCGGAAGTA

GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer

Match Rank:10
Score:0.89
Offset:-3
Orientation:forward strand
Alignment:---CGGAAGTA
NACCGGAAGT-