Information for 15-GGAGC (Motif 20)


Reverse Opposite:

p-value:1e-2
log p-value:-6.453e+00
Information Content per bp:1.530
Number of Target Sequences with motif6569.0
Percentage of Target Sequences with motif99.24%
Number of Background Sequences with motif37584.8
Percentage of Background Sequences with motif98.84%
Average Position of motif in Targets1076.0 +/- 479.3bp
Average Position of motif in Background1065.4 +/- 603.6bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)7.76
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.96
Offset:-1
Orientation:reverse strand
Alignment:-GGAGC
CGGAGC

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.79
Offset:1
Orientation:forward strand
Alignment:GGAGC-
-CAGCC

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.78
Offset:-1
Orientation:reverse strand
Alignment:-GGAGC----
GGGAGGACNG

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.74
Offset:-6
Orientation:forward strand
Alignment:------GGAGC-
GRTGMTRGAGCC

POL008.1_DCE_S_I/Jaspar

Match Rank:5
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-GGAGC
NGAAGC

PB0099.1_Zfp691_1/Jaspar

Match Rank:6
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----GGAGC--------
NNNNTGAGCACTGTNNG

PB0154.1_Osr1_2/Jaspar

Match Rank:7
Score:0.64
Offset:-7
Orientation:reverse strand
Alignment:-------GGAGC----
NNNTTAGGTAGCNTNT

PB0203.1_Zfp691_2/Jaspar

Match Rank:8
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------GGAGC------
NTNNNAGGAGTCTCNTN

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GGAGC----
TGGAACAGMA

PB0050.1_Osr1_1/Jaspar

Match Rank:10
Score:0.61
Offset:-7
Orientation:forward strand
Alignment:-------GGAGC----
ATTTACAGTAGCAAAA