Information for 19-CAACA (Motif 22)


Reverse Opposite:

p-value:1e-2
log p-value:-5.233e+00
Information Content per bp:1.530
Number of Target Sequences with motif5733.0
Percentage of Target Sequences with motif86.61%
Number of Background Sequences with motif32480.3
Percentage of Background Sequences with motif85.42%
Average Position of motif in Targets1036.3 +/- 608.3bp
Average Position of motif in Background1022.7 +/- 700.8bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.75
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0120.1_Foxj1_2/Jaspar

Match Rank:1
Score:0.76
Offset:-6
Orientation:forward strand
Alignment:------CAACA----
ATGTCACAACAACAC

SCRT2/MA0744.1/Jaspar

Match Rank:2
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---CAACA-----
ATGCAACAGGTGG

PB0122.1_Foxk1_2/Jaspar

Match Rank:3
Score:0.74
Offset:-7
Orientation:forward strand
Alignment:-------CAACA---
CAAACAACAACACCT

SCRT1/MA0743.1/Jaspar

Match Rank:4
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---CAACA-------
GAGCAACAGGTGGTT

MF0011.1_HMG_class/Jaspar

Match Rank:5
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:CAACA--
-AACAAT

Foxj2/MA0614.1/Jaspar

Match Rank:6
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--CAACA-
GTAAACAA

PB0121.1_Foxj3_2/Jaspar

Match Rank:7
Score:0.72
Offset:-7
Orientation:forward strand
Alignment:-------CAACA-----
AACACCAAAACAAAGGA

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---CAACA--
TTGCAACATN

FOXO4/MA0848.1/Jaspar

Match Rank:9
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--CAACA
GTAAACA

Sox5/MA0087.1/Jaspar

Match Rank:10
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:CAACA--
NAACAAT