Information for 10-CTGG (Motif 24)


Reverse Opposite:

p-value:1e0
log p-value:-1.956e+00
Information Content per bp:1.530
Number of Target Sequences with motif6617.0
Percentage of Target Sequences with motif99.97%
Number of Background Sequences with motif37995.4
Percentage of Background Sequences with motif99.92%
Average Position of motif in Targets1065.7 +/- 544.7bp
Average Position of motif in Background1052.4 +/- 642.3bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)17.80
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:1
Score:0.85
Offset:-3
Orientation:forward strand
Alignment:---CTGG---
GGTCTGGCAT

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.81
Offset:-3
Orientation:forward strand
Alignment:---CTGG---
WDNCTGGGCA

NFIC/MA0161.1/Jaspar

Match Rank:3
Score:0.75
Offset:0
Orientation:forward strand
Alignment:CTGG--
TTGGCA

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-CTGG-
GCTGTG

PB0060.1_Smad3_1/Jaspar

Match Rank:5
Score:0.72
Offset:-8
Orientation:reverse strand
Alignment:--------CTGG-----
NNTNNTGTCTGGNNTNG

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----CTGG
CTGTCTGG

PB0195.1_Zbtb3_2/Jaspar

Match Rank:7
Score:0.70
Offset:-6
Orientation:forward strand
Alignment:------CTGG------
CAATCACTGGCAGAAT

NFIX/MA0671.1/Jaspar

Match Rank:8
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-CTGG----
NTTGGCANN

ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.70
Offset:-5
Orientation:forward strand
Alignment:-----CTGG-
AACATCTGGA

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.69
Offset:-6
Orientation:forward strand
Alignment:------CTGG
VBSYGTCTGG