Information for 4-CAAAAACG (Motif 5)


Reverse Opposite:

p-value:1e-17
log p-value:-4.135e+01
Information Content per bp:1.801
Number of Target Sequences with motif1739.0
Percentage of Target Sequences with motif26.27%
Number of Background Sequences with motif8118.8
Percentage of Background Sequences with motif21.35%
Average Position of motif in Targets1059.5 +/- 582.2bp
Average Position of motif in Background1023.0 +/- 727.1bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0044.1_Homez/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CAAAAACG-------
NNTAAAAACGATGTTNT

POL007.1_BREd/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CAAAAACG
NANANAC-

PB0145.1_Mafb_2/Jaspar

Match Rank:3
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------CAAAAACG-
CAATTGCAAAAATAT

PB0122.1_Foxk1_2/Jaspar

Match Rank:4
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CAAAAACG---
CAAACAACAACACCT

IRF7/MA0772.1/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CAAAAACG-----
ACGAAAGCGAAAGT

BARHL2/MA0635.1/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CAAAAACG--
GCTAAACGGT

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:7
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CAAAAACG-----
-AGAAACGAAAGT

PB0106.1_Arid5a_2/Jaspar

Match Rank:8
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CAAAAACG------
CATACAATACGAAATAA

PB0131.1_Gmeb1_2/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CAAAAACG-------
TNAACGACGTCGNCCA

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.55
Offset:-6
Orientation:forward strand
Alignment:------CAAAAACG-
ARGAGGMCAAAATGW