Information for 5-TATTGGCG (Motif 6)


Reverse Opposite:

p-value:1e-17
log p-value:-4.099e+01
Information Content per bp:1.790
Number of Target Sequences with motif1330.0
Percentage of Target Sequences with motif20.09%
Number of Background Sequences with motif5969.4
Percentage of Background Sequences with motif15.70%
Average Position of motif in Targets996.6 +/- 532.0bp
Average Position of motif in Background1017.1 +/- 649.8bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC/MA0161.1/Jaspar

Match Rank:1
Score:0.78
Offset:2
Orientation:forward strand
Alignment:TATTGGCG
--TTGGCA

NFY(CCAAT)/Promoter/Homer

Match Rank:2
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--TATTGGCG
CCGATTGGCT

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:TATTGGCG--
-NTTGGCANN

POL004.1_CCAAT-box/Jaspar

Match Rank:4
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-TATTGGCG---
TGATTGGCTANN

YY2/MA0748.1/Jaspar

Match Rank:5
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:TATTGGCG---
TAATGGCGGNC

NFYB/MA0502.1/Jaspar

Match Rank:6
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--TATTGGCG-----
CTGATTGGTCNATTT

NFIA/MA0670.1/Jaspar

Match Rank:7
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TATTGGCG--
NNTTGGCANN

PB0112.1_E2F2_2/Jaspar

Match Rank:8
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TATTGGCG-------
NNNNTTGGCGCCGANNN

HOXB13/MA0901.1/Jaspar

Match Rank:9
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----TATTGGCG
NTTTTATTGG--

PB0113.1_E2F3_2/Jaspar

Match Rank:10
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TATTGGCG-------
NNNNTTGGCGCCGANNN