Information for 6-GCCTACGC (Motif 7)


Reverse Opposite:

p-value:1e-17
log p-value:-3.997e+01
Information Content per bp:1.804
Number of Target Sequences with motif3478.0
Percentage of Target Sequences with motif52.55%
Number of Background Sequences with motif17803.7
Percentage of Background Sequences with motif46.82%
Average Position of motif in Targets1049.6 +/- 411.0bp
Average Position of motif in Background1050.0 +/- 552.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.45
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

EGR2/MA0472.2/Jaspar

Match Rank:1
Score:0.78
Offset:-2
Orientation:forward strand
Alignment:--GCCTACGC-
ACGCCCACGCA

NRF1/MA0506.1/Jaspar

Match Rank:2
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--GCCTACGC-
GCGCCTGCGCA

EGR3/MA0732.1/Jaspar

Match Rank:3
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----GCCTACGC---
CTACGCCCACGCACT

EGR4/MA0733.1/Jaspar

Match Rank:4
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----GCCTACGC----
TTACGCCCACGCATTT

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:5
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---GCCTACGC-
YCCGCCCACGCN

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:6
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GCCTACGC--
GCGCATGCGCAG

NRF(NRF)/Promoter/Homer

Match Rank:7
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GCCTACGC--
GCGCATGCGCAC

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:8
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GCCTACGC
AGGCCTAG--

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GCCTACGC-
CRCCCACGCA

PB0010.1_Egr1_1/Jaspar

Match Rank:10
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GCCTACGC---
TCCGCCCCCGCATT