Information for 7-TAGCGCTT (Motif 8)


Reverse Opposite:

p-value:1e-17
log p-value:-3.947e+01
Information Content per bp:1.800
Number of Target Sequences with motif1936.0
Percentage of Target Sequences with motif29.25%
Number of Background Sequences with motif9221.7
Percentage of Background Sequences with motif24.25%
Average Position of motif in Targets1019.3 +/- 528.4bp
Average Position of motif in Background1036.8 +/- 650.5bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:1
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TAGCGCTT
TGTCGGTT

RUNX2/MA0511.2/Jaspar

Match Rank:2
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TAGCGCTT-
TTGCGGTTT

PB0046.1_Mybl1_1/Jaspar

Match Rank:3
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TAGCGCTT-----
NNANTAACGGTTNNNAN

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TAGCGCTT
CAGCC---

PB0045.1_Myb_1/Jaspar

Match Rank:5
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----TAGCGCTT-----
NNNNTAACGGTTNNNAN

PB0112.1_E2F2_2/Jaspar

Match Rank:6
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----TAGCGCTT----
NNNNTTGGCGCCGANNN

RUNX3/MA0684.1/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TAGCGCTT-
TTTGCGGTTT

NKX2-3/MA0672.1/Jaspar

Match Rank:8
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TAGCGCTT---
-ACCACTTGAA

PB0155.1_Osr2_2/Jaspar

Match Rank:9
Score:0.56
Offset:-8
Orientation:reverse strand
Alignment:--------TAGCGCTT
NNTGTAGGTAGCANNT

PB0113.1_E2F3_2/Jaspar

Match Rank:10
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----TAGCGCTT----
NNNNTTGGCGCCGANNN