Information for 10-GCGACGAT (Motif 9)


Reverse Opposite:

p-value:1e-16
log p-value:-3.728e+01
Information Content per bp:1.794
Number of Target Sequences with motif1615.0
Percentage of Target Sequences with motif24.40%
Number of Background Sequences with motif7552.7
Percentage of Background Sequences with motif19.86%
Average Position of motif in Targets1074.4 +/- 452.3bp
Average Position of motif in Background1058.9 +/- 607.6bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0179.1_Sp100_2/Jaspar

Match Rank:1
Score:0.68
Offset:-7
Orientation:reverse strand
Alignment:-------GCGACGAT
NNTTTANNCGACGNA

ZBTB7A/MA0750.1/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GCGACGAT---
GGCGACCACCGA

GLI2/MA0734.1/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GCGACGAT----
GCGACCACACTG

PB0131.1_Gmeb1_2/Jaspar

Match Rank:4
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GCGACGAT-----
TGGGCGACGTCGTTAA

PB0112.1_E2F2_2/Jaspar

Match Rank:5
Score:0.59
Offset:-7
Orientation:reverse strand
Alignment:-------GCGACGAT--
NNNNTTGGCGCCGANNN

PB0113.1_E2F3_2/Jaspar

Match Rank:6
Score:0.58
Offset:-7
Orientation:reverse strand
Alignment:-------GCGACGAT--
NNNNTTGGCGCCGANNN

ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GCGACGAT-----
GGGCGATGACCAYTC

PB0127.1_Gata6_2/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GCGACGAT---------
GCGGCGATATCGCAGCG

Sox17/MA0078.1/Jaspar

Match Rank:9
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GCGACGAT---
--GACAATGNN

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:10
Score:0.55
Offset:-7
Orientation:forward strand
Alignment:-------GCGACGAT
CCGCATAGCAACGGA