Homer de novo Motif Results (P2-promoterbound-genes-motifs-new-2/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 4686
Total background sequences = 40393
* - possible false positive

Rank	Motif	P-value	log P-pvalue	% of Targets	% of Background	STD(Bg STD)	Best Match/Details	Motif File
1		1e-78	-1.818e+02	50.83%	36.49%	416.4bp (578.7bp)	Atf1/MA0604.1/Jaspar(0.979) More Information \| Similar Motifs Found	motif file (matrix)
2		1e-61	-1.412e+02	46.91%	34.44%	344.8bp (463.7bp)	ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer(0.983) More Information \| Similar Motifs Found	motif file (matrix)
3		1e-35	-8.089e+01	43.90%	34.57%	405.0bp (529.8bp)	NFY(CCAAT)/Promoter/Homer(0.917) More Information \| Similar Motifs Found	motif file (matrix)
4		1e-33	-7.758e+01	70.00%	60.99%	497.0bp (617.6bp)	Ahr::Arnt/MA0006.1/Jaspar(0.707) More Information \| Similar Motifs Found	motif file (matrix)
5		1e-32	-7.580e+01	63.44%	54.27%	429.8bp (554.9bp)	YY2/MA0748.1/Jaspar(0.744) More Information \| Similar Motifs Found	motif file (matrix)
6		1e-32	-7.534e+01	77.36%	69.06%	500.1bp (621.0bp)	PH0077.1_Hoxd12/Jaspar(0.805) More Information \| Similar Motifs Found	motif file (matrix)
7		1e-26	-5.994e+01	96.73%	92.97%	415.2bp (523.9bp)	Sp1(Zf)/Promoter/Homer(0.894) More Information \| Similar Motifs Found	motif file (matrix)
8		1e-24	-5.727e+01	90.16%	84.73%	441.2bp (561.5bp)	ZBTB33/MA0527.1/Jaspar(0.854) More Information \| Similar Motifs Found	motif file (matrix)
9		1e-23	-5.469e+01	47.48%	39.74%	507.1bp (613.9bp)	Sox17/MA0078.1/Jaspar(0.675) More Information \| Similar Motifs Found	motif file (matrix)
10		1e-19	-4.575e+01	82.27%	76.42%	553.4bp (685.5bp)	BARHL2/MA0635.1/Jaspar(0.809) More Information \| Similar Motifs Found	motif file (matrix)
11		1e-19	-4.567e+01	62.29%	55.26%	563.1bp (662.5bp)	RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer(0.727) More Information \| Similar Motifs Found	motif file (matrix)
12		1e-18	-4.204e+01	33.38%	27.16%	469.3bp (603.3bp)	PB0180.1_Sp4_2/Jaspar(0.694) More Information \| Similar Motifs Found	motif file (matrix)
13		1e-17	-4.144e+01	72.96%	66.70%	459.7bp (583.5bp)	PB0180.1_Sp4_2/Jaspar(0.743) More Information \| Similar Motifs Found	motif file (matrix)
14 *		1e-1	-3.813e+00	99.91%	99.77%	508.3bp (596.2bp)	MF0004.1_Nuclear_Receptor_class/Jaspar(0.869) More Information \| Similar Motifs Found	motif file (matrix)
15 *		1e-1	-3.473e+00	98.38%	97.97%	626.0bp (714.3bp)	PB0152.1_Nkx3-1_2/Jaspar(0.736) More Information \| Similar Motifs Found	motif file (matrix)
16 *		1e0	-1.963e+00	99.98%	99.92%	540.5bp (605.9bp)	Hand1::Tcf3/MA0092.1/Jaspar(0.845) More Information \| Similar Motifs Found	motif file (matrix)